Difference between revisions of "OpuBC"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
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{{SubtiWiki regulon|[[GbsR regulon]]}},
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{{SubtiWiki regulon|[[OpcR regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuBC_3460503_3461423_-1 opuBC] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuBC_3460503_3461423_-1 opuBC] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|10216873}}
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|10216873}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 
** [[GbsR]]: transcription repression {{PubMed|22408163}}
 
** [[GbsR]]: transcription repression {{PubMed|22408163}}
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** [[OpcR]]: transcription repression {{PubMed|23960087}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
'''Additional publications:''' {{PubMed|22408163,21366542,21658392}}
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<pubmed>10092453,9925583,10216873, 21296969 </pubmed>
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<pubmed>22408163,21366542,21658392 10092453,9925583,10216873, 21296969 23960087</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 07:53, 22 August 2013

Gene name opuBC
Synonyms proX
Essential no
Product choline ABC transporter (binding protein)
Function compatible solute transport
Gene expression levels in SubtiExpress: opuBC
Interactions involving this protein in SubtInteract: OpuBC
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 34 kDa, 6.618
Gene length, protein length 918 bp, 306 aa
Immediate neighbours opuBD, opuBB
Sequences Protein DNA DNA_with_flanks
Genetic context
OpuBC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuBC expression.png















Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

GbsR regulon, OpcR regulon

The gene

Basic information

  • Locus tag: BSU33710

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): OpuCC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References