Difference between revisions of "YbaF"
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
** ([[YbxA]]-[[YbaE]])-[[YbaF]] {{PubMed|10092453}} | ** ([[YbxA]]-[[YbaE]])-[[YbaF]] {{PubMed|10092453}} | ||
+ | ** [[YbaF]]-[[ThiT]] {{PubMed|20497229}} | ||
+ | ** [[YbaF]]-[[RibU]] {{PubMed|20497229}} | ||
+ | ** [[YbaF]]-[[YuiG]] {{PubMed|20497229}} | ||
+ | ** [[YbaF]]-[[YhfU]] {{PubMed|20497229}} | ||
+ | ** [[YbaF]]-[[TrpP]] {{PubMed|20497229}} | ||
− | * '''[[Localization]]:''' cell membrane | + | * '''[[Localization]]:''' |
+ | ** cell membrane {{PubMed|20497229}} | ||
=== Database entries === | === Database entries === |
Revision as of 19:20, 13 July 2013
- Description: trans-membrane T component of ECF transporters
Gene name | ybaF |
Synonyms | ecfT |
Essential | no |
Product | ECF transporter (membrane-spanning protein) |
Function | uptake of micronutrients |
Gene expression levels in SubtiExpress: ybaF | |
Interactions involving this protein in SubtInteract: YbaF | |
MW, pI | 29 kDa, 10.175 |
Gene length, protein length | 795 bp, 265 aa |
Immediate neighbours | ybaE, truA |
Sequences | Protein DNA DNA_with_flanks |
Genetic context ![]() This image was kindly provided by SubtiList
| |
Expression at a glance PubMed![]() |
Contents
Categories containing this gene/protein
ECF transporter, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01470
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: cbiQ family, T proteins of ECF transporters
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- UniProt: P70972
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Thomas Eitinger, Dmitry A Rodionov, Mathias Grote, Erwin Schneider
Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions.
FEMS Microbiol Rev: 2011, 35(1);3-67
[PubMed:20497229]
[WorldCat.org]
[DOI]
(I p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
Original publications