Difference between revisions of "YbaF"
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| − | * '''Description:''' trans-membrane T component of | + | * '''Description:''' trans-membrane T component of [[ECF transporter]] <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || [[ECF transporter]] (membrane-spanning protein) |
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of micronutrients | |style="background:#ABCDEF;" align="center"|'''Function''' || uptake of micronutrients | ||
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[ECF transporter]]}}, |
{{SubtiWiki category|[[membrane proteins]]}} | {{SubtiWiki category|[[membrane proteins]]}} | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' cbiQ family | + | * '''Protein family:''' cbiQ family, T proteins of [[ECF transporter]]s |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
Revision as of 14:49, 13 July 2013
- Description: trans-membrane T component of ECF transporter
| Gene name | ybaF |
| Synonyms | ecfT |
| Essential | no |
| Product | ECF transporter (membrane-spanning protein) |
| Function | uptake of micronutrients |
| Gene expression levels in SubtiExpress: ybaF | |
| Interactions involving this protein in SubtInteract: YbaF | |
| MW, pI | 29 kDa, 10.175 |
| Gene length, protein length | 795 bp, 265 aa |
| Immediate neighbours | ybaE, truA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
ECF transporter, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01470
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: cbiQ family, T proteins of ECF transporters
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- UniProt: P70972
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
Ke Xu, Minhua Zhang, Qin Zhao, Fang Yu, Hui Guo, Chengyuan Wang, Fangyuan He, Jianping Ding, Peng Zhang
Crystal structure of a folate energy-coupling factor transporter from Lactobacillus brevis.
Nature: 2013, 497(7448);268-71
[PubMed:23584589]
[WorldCat.org]
[DOI]
(I p)
Josy ter Beek, Ria H Duurkens, Guus B Erkens, Dirk Jan Slotboom
Quaternary structure and functional unit of energy coupling factor (ECF)-type transporters.
J Biol Chem: 2011, 286(7);5471-5
[PubMed:21135102]
[WorldCat.org]
[DOI]
(I p)
