Difference between revisions of "AntE"

From SubtiWiki
Jump to: navigation, search
Line 36: Line 36:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 111: Line 107:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=antE_2602979_2603275_1 antE] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=antE_2602979_2603275_1 antE] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|9864351}}
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9864351}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 139: Line 135:
  
 
=References=
 
=References=
'''Additional publications:''' {{PubMed|20817675}}
+
<pubmed>9864351 20817675</pubmed>
<pubmed>9864351 </pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:38, 18 June 2013

  • Description: dnaG overlapping gene of unknown function

Gene name antE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: antE
MW, pI 11 kDa, 10.718
Gene length, protein length 294 bp, 98 aa
Immediate neighbours dnaG, yqxD
Gene sequence (+200bp) Protein sequence
Genetic context
AntE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AntE expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU25220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675] [WorldCat.org] [DOI] (I p)

L F Wang, S S Park, R H Doi
A novel Bacillus subtilis gene, antE, temporally regulated and convergent to and overlapping dnaE.
J Bacteriol: 1999, 181(1);353-6
[PubMed:9864351] [WorldCat.org] [DOI] (P p)