Difference between revisions of "RemA"
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| − | * '''Description:''' | + | * '''Description:''' transcriptional regulator of the extracellular matrix genes, acts in parallel to [[SinR]], [[AbrB]], and [[DegU]] <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || regulator of the extracellular matrix | + | |style="background:#ABCDEF;" align="center"| '''Product''' || regulator of the extracellular matrix genes |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[biofilm formation]] | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[biofilm formation]] | ||
| Line 40: | Line 40: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| + | {{SubtiWiki category|[[transcription factors and their control]]}}, | ||
{{SubtiWiki category|[[biofilm formation]]}}, | {{SubtiWiki category|[[biofilm formation]]}}, | ||
{{SubtiWiki category|[[sporulation proteins]]}} | {{SubtiWiki category|[[sporulation proteins]]}} | ||
| Line 45: | Line 46: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[SigF regulon]]}} | {{SubtiWiki regulon|[[SigF regulon]]}} | ||
| + | |||
| + | =The [[RemA regulon]]= | ||
=The gene= | =The gene= | ||
| Line 136: | Line 139: | ||
=References= | =References= | ||
| − | + | <pubmed>,19363116, 22329926 23123912 23396918 23646920 </pubmed> | |
| − | <pubmed>,19363116, | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 07:50, 24 May 2013
- Description: transcriptional regulator of the extracellular matrix genes, acts in parallel to SinR, AbrB, and DegU
| Gene name | remA |
| Synonyms | ylzA |
| Essential | no |
| Product | regulator of the extracellular matrix genes |
| Function | control of biofilm formation |
| Gene expression levels in SubtiExpress: remA | |
| Metabolic function and regulation of this protein in SubtiPathways: Nucleotides (regulation) | |
| MW, pI | 9 kDa, 7.178 |
| Gene length, protein length | 267 bp, 89 aa |
| Immediate neighbours | yloC, gmk |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription factors and their control, biofilm formation, sporulation proteins
This gene is a member of the following regulons
The RemA regulon
The gene
Basic information
- Locus tag: BSU15670
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0296 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q7WY72
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Daniel Kearns, Indiana University, Bloomington, USA, homepage
Your additional remarks
References
