Difference between revisions of "SsrA"

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* '''Description:''' write here <br/><br/>
+
* '''Description:''' tmRNA<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || E. coli 10Sa RNA (small stable RNA) homolog (transfer-messenger RNA tmRNA)
+
|style="background:#ABCDEF;" align="center"| '''Product''' || tmRNA
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Function''' || trans-translation
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' ||  kDa, 
+
 
|-
+
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' ||  bp,  aa
 
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ssrA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
 
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ssrA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ssrA_protein.txt Protein sequence]'''
 
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ssrA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ssrA_context.gif]]
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* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00097]
 
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00097]
 
=== Additional information===
 
 
 
=The protein=
 
 
=== Basic information/ Evolution ===
 
 
* '''Catalyzed reaction/ biological activity:'''
 
 
* '''Protein family:'''
 
 
* '''Paralogous protein(s):'''
 
 
=== Extended information on the protein ===
 
 
* '''Kinetic information:'''
 
 
* '''Domains:'''
 
 
* '''Modification:'''
 
 
* '''Cofactor(s):'''
 
 
* '''Effectors of protein activity:'''
 
 
* '''Interactions:'''
 
 
* '''Localization:'''
 
 
=== Database entries ===
 
  
 
* '''Structure:'''
 
* '''Structure:'''
 
* '''Swiss prot entry:'''
 
 
* '''KEGG entry:'''
 
 
* '''E.C. number:'''
 
  
 
=== Additional information===
 
=== Additional information===
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* '''Antibody:'''
 
* '''Antibody:'''
  
=Labs working on this gene/protein=
+
=Labs working on this gene/RNA=
  
 
=Your additional remarks=
 
=Your additional remarks=

Revision as of 11:59, 20 February 2009

  • Description: tmRNA

Gene name ssrA
Synonyms
Essential no
Product tmRNA
Function trans-translation
Gene length bp
Immediate neighbours
Gene sequence (+200bp)
Genetic context
SsrA context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]
  • Structure:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/RNA

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed