Difference between revisions of "XynD"
| Line 27: | Line 27: | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |- | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xynD_1944113_1945654_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:xynD_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xynD_1944113_1945654_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:xynD_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU18160]] |
|- | |- | ||
|} | |} | ||
Revision as of 13:30, 16 May 2013
- Description: arabinoxylan arabinofuranohydrolase
| Gene name | xynD |
| Synonyms | |
| Essential | no |
| Product | arabinoxylan arabinofuranohydrolase |
| Function | arabinoxylan degradation |
| Gene expression levels in SubtiExpress: xynD | |
| MW, pI | 54 kDa, 8.031 |
| Gene length, protein length | 1539 bp, 513 aa |
| Immediate neighbours | xynC, yngA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18160
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 43 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- extracellular (signal peptide) PubMed
Database entries
- Structure: 3C7O
- UniProt: Q45071
- KEGG entry: [2]
- E.C. number: 3.2.1.55
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
