Difference between revisions of "FadF"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[acdA]]'', ''[[ywjE]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[acdA]]'', ''[[ywjE]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37180 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37180 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37180 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37180 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37180 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37180 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ywjF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ywjF_context.gif]]

Revision as of 11:31, 14 May 2013

  • Description: similar to iron-sulphur-binding reductase

Gene name fadF
Synonyms ywjF
Essential no
Product unknown
Function fatty acid degradation
Gene expression levels in SubtiExpress: fadF
Metabolic function and regulation of this protein in SubtiPathways:
Fatty acid degradation
MW, pI 79 kDa, 6.526
Gene length, protein length 2115 bp, 705 aa
Immediate neighbours acdA, ywjE
Sequences Protein DNA DNA_with_flanks
Genetic context
YwjF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FadF expression.png



















Categories containing this gene/protein

utilization of lipids, membrane proteins

This gene is a member of the following regulons

FadR regulon

The gene

Basic information

  • Locus tag: BSU37180

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): contains an iron-sulfur cluster
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the absence of long-chain fatty acids (FadR) PubMed
    • repressed by glucose (5-fold) PubMed
    • strongly induced in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed