Difference between revisions of "PgcM"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[clpP]]'', ''[[malL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[clpP]]'', ''[[malL]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34550 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34550 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:pgcM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:pgcM_context.gif]]

Revision as of 11:21, 14 May 2013

  • Description: β-phosphoglucomutase/ glucose-1-phosphate phosphodismutase

Gene name pgcM
Synonyms yvdM
Essential no
Product beta-phosphoglucomutase
(EC 5.4.2.6 and EC 2.7.1.41)
Function starch and maltodextrin utilization
Gene expression levels in SubtiExpress: pgcM
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 24 kDa, 4.76
Gene length, protein length 678 bp, 226 aa
Immediate neighbours clpP, malL
Sequences Protein DNA DNA_with_flanks
Genetic context
PgcM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PgcM expression.png




























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU34550

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate (according to Swiss-Prot)
  • Protein family: CbbY/cbbZ/gph/yieH family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3NAS; 1ZOL (from Lactococcus lactis, 48% identity, 66% similarity) PubMed
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References