Difference between revisions of "YubD"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytG]]'', ''[[yubC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytG]]'', ''[[yubC]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31130 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31130 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31130 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31130 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31130 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31130 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yubD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yubD_context.gif]]

Revision as of 11:07, 14 May 2013

  • Description: similar to multidrug resistance protein

Gene name yubD
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yubD
MW, pI 54 kDa, 9.965
Gene length, protein length 1533 bp, 511 aa
Immediate neighbours lytG, yubC
Sequences Protein DNA DNA_with_flanks
Genetic context
YubD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YubD expression.png
























Categories containing this gene/protein

transporters/ other, resistance against toxins/ antibiotics, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU31130

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: major facilitator superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References