Difference between revisions of "YtpQ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytpR]]'', ''[[ytpP]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytpR]]'', ''[[ytpP]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29830 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29830 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ytpQ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytpQ_context.gif]]

Revision as of 11:02, 14 May 2013

  • Description: unknown

Gene name ytpQ
Synonyms
Essential no
Product unknown
Function maybe involved in iron homeostasis
Gene expression levels in SubtiExpress: ytpQ
MW, pI 30 kDa, 5.3
Gene length, protein length 807 bp, 269 aa
Immediate neighbours ytpR, ytpP
Sequences Protein DNA DNA_with_flanks
Genetic context
YtpQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtpQ expression.png















Categories containing this gene/protein

acquisition of iron, resistance against oxidative and electrophile stress

This gene is a member of the following regulons

Spx regulon

The gene

Basic information

  • Locus tag: BSU29830

Phenotypes of a mutant

  • derepression of the Fur and PerR regulons PubMed
  • elevated oxidative protein damage upon exposure of the cells to methylglyoxal PubMed
  • the spx ytpQ doulbe mutant shows reduced growth in minimal medium and hypersensitivity to methylglyoxal PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0354 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References