Difference between revisions of "YtkL"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytlI]]'', ''[[ytkK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytlI]]'', ''[[ytkK]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29410 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29410 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytkL_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytkL_context.gif]]

Revision as of 11:00, 14 May 2013

  • Description: general stress protein

Gene name ytkL
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ytkL
MW, pI 24 kDa, 5.01
Gene length, protein length 681 bp, 227 aa
Immediate neighbours ytlI, ytkK
Sequences Protein DNA DNA_with_flanks
Genetic context
YtkL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtkL expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU29410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0173 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Alia Lapidus, Nathalie Galleron, Alexei Sorokin, S Dusko Ehrlich
Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region.
Microbiology (Reading): 1997, 143 ( Pt 11);3431-3441
[PubMed:9387221] [WorldCat.org] [DOI] (P p)