Difference between revisions of "YtzA"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytvI]]'', ''[[pyk]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytvI]]'', ''[[pyk]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29170 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29170 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29170 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29170 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29170 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29170 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytzA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ytzA_context.gif]]

Revision as of 10:59, 14 May 2013

  • Description: unknown

Gene name ytzA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ytzA
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 13 kDa, 10.108
Gene length, protein length 381 bp, 127 aa
Immediate neighbours ytvI, pyk
Sequences Protein DNA DNA_with_flanks
Genetic context
YtzA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtzA expression.png




























Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29170

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0716 (fxsA) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)

H Ludwig, G Homuth, M Schmalisch, F M Dyka, M Hecker, J Stülke
Transcription of glycolytic genes and operons in Bacillus subtilis: evidence for the presence of multiple levels of control of the gapA operon.
Mol Microbiol: 2001, 41(2);409-22
[PubMed:11489127] [WorldCat.org] [DOI] (P p)