Difference between revisions of "YrkR"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrkS]]'', ''[[yrkQ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrkS]]'', ''[[yrkQ]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26410 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26410 DNA_with_flanks]
 
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Revision as of 10:48, 14 May 2013

  • Description: unknown

Gene name yrkR
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrkR
MW, pI 16 kDa, 8.824
Gene length, protein length 417 bp, 139 aa
Immediate neighbours yrkS, yrkQ
Sequences Protein DNA DNA_with_flanks
Genetic context
YrkR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrkR expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

YrkP regulon

The gene

Basic information

  • Locus tag: BSU26410

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: psiE family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mitsuo Ogura, Taku Ohsawa, Teruo Tanaka
Identification of the sequences recognized by the Bacillus subtilis response regulator YrkP.
Biosci Biotechnol Biochem: 2008, 72(1);186-96
[PubMed:18175906] [WorldCat.org] [DOI] (I p)