Difference between revisions of "YqhB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[corA]]'', ''[[rsbRD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[corA]]'', ''[[rsbRD]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24750 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24750 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24750 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24750 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24750 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24750 DNA_with_flanks]
 
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Revision as of 10:43, 14 May 2013

  • Description: general stress protein, similar to hemolysin

Gene name yqhB
Synonyms
Essential no
Product unknown
Function survival at low temperature
Gene expression levels in SubtiExpress: yqhB
MW, pI 49 kDa, 5.541
Gene length, protein length 1326 bp, 442 aa
Immediate neighbours corA, rsbRD
Sequences Protein DNA DNA_with_flanks
Genetic context
YqhB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqhB expression.png


























Categories containing this gene/protein

general stress proteins (controlled by SigB), membrane proteins

This gene is a member of the following regulons

LexA regulon, SigB regulon

The gene

Basic information

  • Locus tag: BSU24750

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0053 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Nora Au, Elke Kuester-Schoeck, Veena Mandava, Laura E Bothwell, Susan P Canny, Karen Chachu, Sierra A Colavito, Shakierah N Fuller, Eli S Groban, Laura A Hensley, Theresa C O'Brien, Amish Shah, Jessica T Tierney, Louise L Tomm, Thomas M O'Gara, Alexi I Goranov, Alan D Grossman, Charles M Lovett
Genetic composition of the Bacillus subtilis SOS system.
J Bacteriol: 2005, 187(22);7655-66
[PubMed:16267290] [WorldCat.org] [DOI] (P p)

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)