Difference between revisions of "AsnS"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dnaD]]'', ''[[aspB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dnaD]]'', ''[[aspB]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22360 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22360 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:asnS_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:asnS_context.gif]]

Revision as of 10:33, 14 May 2013

  • Description: asparagyl-tRNA synthetase

Gene name asnS
Synonyms
Essential yes PubMed
Product asparagyl-tRNA synthetase)
Function translation
Gene expression levels in SubtiExpress: asnS
Metabolic function and regulation of this protein in SubtiPathways:
tRNA charging
MW, pI 48 kDa, 5.123
Gene length, protein length 1290 bp, 430 aa
Immediate neighbours dnaD, aspB
Sequences Protein DNA DNA_with_flanks
Genetic context
AsnS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AsnS expression.png




























Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22360

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn) (according to Swiss-Prot)
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References