Difference between revisions of "KamA"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yokU]]'', ''[[yodP]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yokU]]'', ''[[yodP]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19690 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19690 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19690 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19690 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19690 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19690 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:kamA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:kamA_context.gif]]

Revision as of 10:26, 14 May 2013

  • Description: lysine 2,3-aminomutase

Gene name kamA
Synonyms yodO
Essential no
Product lysine 2,3-aminomutase
Function unknown
Gene expression levels in SubtiExpress: kamA
MW, pI 53 kDa, 6.04
Gene length, protein length 1413 bp, 471 aa
Immediate neighbours yokU, yodP
Sequences Protein DNA DNA_with_flanks
Genetic context
KamA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
KamA expression.png

























Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigE regulon


The gene

Basic information

  • Locus tag: BSU19690

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-lysine = beta-lysine
  • Protein family: UPF0720 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Regulation: expressed early during sporuation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed