Difference between revisions of "IspC"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cdsA]]'', ''[[rasP]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cdsA]]'', ''[[rasP]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16550 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16550 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16550 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16550 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:dxr_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:dxr_context.gif]] |
Revision as of 10:15, 14 May 2013
- Description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Gene name | ispC |
Synonyms | yluB, dxr |
Essential | yes PubMed |
Product | 1-deoxy-D-xylulose-5-phosphate reductoisomerase |
Function | biosynthesis of isoprenoids |
Gene expression levels in SubtiExpress: ispC | |
MW, pI | 43 kDa, 5.801 |
Gene length, protein length | 1164 bp, 388 aa |
Immediate neighbours | cdsA, rasP |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
biosynthesis of lipids, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16550
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2-C-methyl-D-erythritol 4-phosphate + NADP+ = 1-deoxy-D-xylulose 5-phosphate + NADPH (according to Swiss-Prot)
- Protein family: DXR family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31753
- KEGG entry: [2]
- E.C. number: 1.1.1.267
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References