Difference between revisions of "MetC"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[metI]]'', ''[[yjcK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[metI]]'', ''[[yjcK]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11880 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11880 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11880 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11880 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11880 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11880 DNA_with_flanks]
 
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Revision as of 09:56, 14 May 2013

  • Description: cystathionine beta-lyase

Gene name metC
Synonyms yjcJ
Essential no
Product cystathionine beta-lyase
Function biosynthesis of methionine
Gene expression levels in SubtiExpress: metC
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 42 kDa, 5.757
Gene length, protein length 1170 bp, 390 aa
Immediate neighbours metI, yjcK
Sequences Protein DNA DNA_with_flanks
Genetic context
YjcJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
MetC expression.png




























Categories containing this gene/protein

biosynthesis/ acquisition of amino acids

This gene is a member of the following regulons

S-box

The gene

Basic information

  • Locus tag: BSU11880

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-cystathionine + H2O = L-homocysteine + NH3 + pyruvate (according to Swiss-Prot)
  • Protein family: trans-sulfuration enzymes family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism: S-box: transcription termination/ antitermination, the S-box riboswitch binds S-adenosylmethionine resulting in termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References