Difference between revisions of "YhcR"

From SubtiWiki
Jump to: navigation, search
Line 23: Line 23:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcQ]]'', ''[[yhcS]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhcQ]]'', ''[[yhcS]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09190 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09190 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09190 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09190 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09190 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09190 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yhcR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yhcR_context.gif]]

Revision as of 09:47, 14 May 2013

  • Description: extracellular non-specific endonuclease, Rnase

Gene name yhcR
Synonyms
Essential no
Product extracellular non-specific endonuclease, Rnase
Function utilization of nucleic acids
Gene expression levels in SubtiExpress: yhcR
Interactions involving this protein in SubtInteract: YhcR
MW, pI 132 kDa, 4.693
Gene length, protein length 3651 bp, 1217 aa
Immediate neighbours yhcQ, yhcS
Sequences Protein DNA DNA_with_flanks
Genetic context
YhcR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhcR expression.png
























Categories containing this gene/protein

biosynthesis/ acquisition of nucleotides, Rnases

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU09190

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YfkN

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

David Bechhofer, Mount Sinai School, New York, USA Homepage

Your additional remarks

References

Additional referencecs: PubMed