Difference between revisions of "GutR"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydjC]]'', ''[[gutB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydjC]]'', ''[[gutB]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU06140 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU06140 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU06140 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU06140 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU06140 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU06140 DNA_with_flanks]
 
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|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gutR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gutR_context.gif]]

Revision as of 09:36, 14 May 2013

  • Description: transcription activator of the gutB-gutP operon

Gene name gutR
Synonyms
Essential no
Product transcription activator
Function regulation of glucitol utilization
Gene expression levels in SubtiExpress: gutR
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 94 kDa, 6.113
Gene length, protein length 2487 bp, 829 aa
Immediate neighbours ydjC, gutB
Sequences Protein DNA DNA_with_flanks
Genetic context
GutR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GutR expression.png




























Categories containing this gene/protein

utilization of specific carbon sources, transcription factors and their control

This gene is a member of the following regulons

The GutR regulon:

The gene

Basic information

  • Locus tag: BSU06140

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Shouji Watanabe, Miyuki Hamano, Hiroshi Kakeshita, Keigo Bunai, Shigeo Tojo, Hirotake Yamaguchi, Yasutaro Fujita, Sui-Lam Wong, Kunio Yamane
Mannitol-1-phosphate dehydrogenase (MtlD) is required for mannitol and glucitol assimilation in Bacillus subtilis: possible cooperation of mtl and gut operons.
J Bacteriol: 2003, 185(16);4816-24
[PubMed:12897001] [WorldCat.org] [DOI] (P p)

K K Poon, J C Chu, S L Wong
Roles of glucitol in the GutR-mediated transcription activation process in Bacillus subtilis: glucitol induces GutR to change its conformation and to bind ATP.
J Biol Chem: 2001, 276(32);29819-25
[PubMed:11390381] [WorldCat.org] [DOI] (P p)

K K Poon, C L Chen, S L Wong
Roles of glucitol in the GutR-mediated transcription activation process in Bacillus subtilis: tight binding of GutR to tis binding site.
J Biol Chem: 2001, 276(13);9620-5
[PubMed:11118449] [WorldCat.org] [DOI] (P p)

R Ye, S N Rehemtulla, S L Wong
Glucitol induction in Bacillus subtilis is mediated by a regulatory factor, GutR.
J Bacteriol: 1994, 176(11);3321-7
[PubMed:8195087] [WorldCat.org] [DOI] (P p)

R Ye, S L Wong
Transcriptional regulation of the Bacillus subtilis glucitol dehydrogenase gene.
J Bacteriol: 1994, 176(11);3314-20
[PubMed:8195086] [WorldCat.org] [DOI] (P p)