Difference between revisions of "AtpH"

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|style="background:#ABCDEF;" align="center"|'''Function''' || ATP synthesis  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || ATP synthesis  
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU36840 atpH]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36840 atpH]
 
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|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 9.572   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 9.572   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[atpA]]'', ''[[atpF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[atpA]]'', ''[[atpF]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15701&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU36840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU36840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU36840 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:atpH_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:atpH_context.gif]]

Revision as of 14:04, 13 May 2013

  • Description: ATP synthase (subunit delta)

Gene name atpH
Synonyms
Essential no
Product ATP synthase (subunit delta))
Function ATP synthesis
Gene expression levels in SubtiExpress: atpH
MW, pI 19 kDa, 9.572
Gene length, protein length 543 bp, 181 aa
Immediate neighbours atpA, atpF
Sequences Protein DNA Advanced_DNA
Genetic context
AtpH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AtpH expression.png
























Categories containing this gene/protein

ATP synthesis, phosphoproteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU36840

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP synthesis see a video
  • Protein family: ATPase delta chain family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-159 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexander K W Elsholz, Kürsad Turgay, Stephan Michalik, Bernd Hessling, Katrin Gronau, Dan Oertel, Ulrike Mäder, Jörg Bernhardt, Dörte Becher, Michael Hecker, Ulf Gerth
Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis.
Proc Natl Acad Sci U S A: 2012, 109(19);7451-6
[PubMed:22517742] [WorldCat.org] [DOI] (I p)

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)

M Santana, M S Ionescu, A Vertes, R Longin, F Kunst, A Danchin, P Glaser
Bacillus subtilis F0F1 ATPase: DNA sequence of the atp operon and characterization of atp mutants.
J Bacteriol: 1994, 176(22);6802-11
[PubMed:7961438] [WorldCat.org] [DOI] (P p)