Difference between revisions of "Pmi"

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(References)
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|style="background:#ABCDEF;" align="center"|'''Function''' || mannose utilization  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || mannose utilization  
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU35790 pmi]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35790 pmi]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 4.982   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 4.982   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytD]]'', ''[[gerBA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytD]]'', ''[[gerBA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15596&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35790 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35790 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35790 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:pmi_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:pmi_context.gif]]

Revision as of 14:00, 13 May 2013

  • Description: mannose-6-phosphate isomerase

Gene name pmi
Synonyms yvyI
Essential no
Product mannose-6-phosphate isomerase
Function mannose utilization
Gene expression levels in SubtiExpress: pmi
MW, pI 35 kDa, 4.982
Gene length, protein length 948 bp, 316 aa
Immediate neighbours lytD, gerBA
Sequences Protein DNA Advanced_DNA
Genetic context
Pmi context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Pmi expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU35790

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: D-mannose 6-phosphate = D-fructose 6-phosphate (according to Swiss-Prot)
  • Protein family: mannose-6-phosphate isomerase type 1 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Soo-Jin Yeom, Yeong-Su Kim, Deok-Kun Oh
Development of novel sugar isomerases by optimization of active sites in phosphosugar isomerases for monosaccharides.
Appl Environ Microbiol: 2013, 79(3);982-8
[PubMed:23204422] [WorldCat.org] [DOI] (I p)

P Margot, C Mauël, D Karamata
The gene of the N-acetylglucosaminidase, a Bacillus subtilis 168 cell wall hydrolase not involved in vegetative cell autolysis.
Mol Microbiol: 1994, 12(4);535-45
[PubMed:7934877] [WorldCat.org] [DOI] (P p)