Difference between revisions of "YvyC"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35350 yvyC] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 12 kDa, 4.698 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 12 kDa, 4.698 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliD]]'', ''[[hag]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliD]]'', ''[[hag]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35350 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yvyC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvyC_context.gif]] | ||
Revision as of 13:58, 13 May 2013
- Description: similar to flagellar protein
| Gene name | yvyC |
| Synonyms | yviH |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yvyC | |
| MW, pI | 12 kDa, 4.698 |
| Gene length, protein length | 327 bp, 109 aa |
| Immediate neighbours | fliD, hag |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35350
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2HC5 (NMR)
- UniProt: P39737
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Alexander Eletsky, Dinesh K Sukumaran, Rong Xiao, Thomas B Acton, Burkhard Rost, Gaetano T Montelione, Thomas Szyperski
NMR structure of protein YvyC from Bacillus subtilis reveals unexpected structural similarity between two PFAM families.
Proteins: 2009, 76(4);1037-41
[PubMed:19455708]
[WorldCat.org]
[DOI]
(I p)
L Chen, J D Helmann
The Bacillus subtilis sigma D-dependent operon encoding the flagellar proteins FliD, FliS, and FliT.
J Bacteriol: 1994, 176(11);3093-101
[PubMed:8195064]
[WorldCat.org]
[DOI]
(P p)
