Difference between revisions of "YqeI"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU25650 yqeI] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 10 kDa, 9.476 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 10 kDa, 9.476 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nadD]]'', ''[[aroD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nadD]]'', ''[[aroD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25650 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25650 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25650 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yqeI_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yqeI_context.gif]] | ||
Revision as of 13:21, 13 May 2013
- Description: similar to predicted RNA-binding protein
| Gene name | yqeI |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yqeI | |
| MW, pI | 10 kDa, 9.476 |
| Gene length, protein length | 288 bp, 96 aa |
| Immediate neighbours | nadD, aroD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25650
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- The E. coli homolog: yhbY
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- UniProt: P54454
- KEGG entry: [2]
- E.C. number:
Additional information
- YqeI might be a RNA-binding protein PubMed. The homolog from E. coli associates to the 50S subunit of the ribosome and is involved in ribosome assembly Ecocyc
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Alison Hunt, Joy P Rawlins, Helena B Thomaides, Jeff Errington
Functional analysis of 11 putative essential genes in Bacillus subtilis.
Microbiology (Reading): 2006, 152(Pt 10);2895-2907
[PubMed:17005971]
[WorldCat.org]
[DOI]
(P p)
Gerard J Ostheimer, Alice Barkan, Brian W Matthews
Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins.
Structure: 2002, 10(11);1593-601
[PubMed:12429100]
[WorldCat.org]
[DOI]
(P p)
