Difference between revisions of "SodF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || detoxification of oxygen radicals | |style="background:#ABCDEF;" align="center"|'''Function''' || detoxification of oxygen radicals | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19330 sodF] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 6.17 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 6.17 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sqhC]]'', ''[[yocR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sqhC]]'', ''[[yocR]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19330 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19330 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19330 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:sodF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:sodF_context.gif]] | ||
Revision as of 13:00, 13 May 2013
- Description: superoxide dismutase
| Gene name | sodF |
| Synonyms | |
| Essential | no |
| Product | superoxide dismutase |
| Function | detoxification of oxygen radicals |
| Gene expression levels in SubtiExpress: sodF | |
| MW, pI | 33 kDa, 6.17 |
| Gene length, protein length | 843 bp, 281 aa |
| Immediate neighbours | sqhC, yocR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation proteins, resistance against oxidative and electrophile stress, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19330
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 superoxide + 2 H+ = O2 + H2O2 (according to Swiss-Prot)
- Protein family: terpene cyclase/mutase family (according to Swiss-Prot)
- Paralogous protein(s): SodA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): contains an iron-sulfur cluster
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O35023
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation in the mother cell PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
