Difference between revisions of "PapB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || degradation of proline-containing peptides | |style="background:#ABCDEF;" align="center"|'''Function''' || degradation of proline-containing peptides | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13860 papB] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[zosA]]'', ''[[ykvZ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[zosA]]'', ''[[ykvZ]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13860 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13860 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13860 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ykvY_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ykvY_context.gif]] | ||
Revision as of 12:40, 13 May 2013
- Description: Xaa-Pro amino-peptidase
| Gene name | papB |
| Synonyms | ykvY |
| Essential | no |
| Product | Xaa-Pro amino-peptidase |
| Function | degradation of proline-containing peptides |
| Gene expression levels in SubtiExpress: papB | |
| Metabolic function and regulation of this protein in SubtiPathways: Alternative nitrogen sources | |
| MW, pI | 40 kDa, 5.171 |
| Gene length, protein length | 1089 bp, 363 aa |
| Immediate neighbours | zosA, ykvZ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of nitrogen sources other than amino acids, coping with hyper-osmotic stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13860
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M24B family (according to Swiss-Prot)
- Paralogous protein(s): PapA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 3Q6D (B. anthracis Xaa-Pro dipeptidase, 35% identity, 55% similarity)
- UniProt: O31689
- KEGG entry: [2]
- E.C. number: 3.4.11.9
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
