Difference between revisions of "IspA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || protein degradation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || protein degradation
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU13190 ispA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13190 ispA]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 4.522   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 4.522   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[metE]]'', ''[[rsbRB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[metE]]'', ''[[rsbRB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://www.ebi.ac.uk/ena/data/view/CAB13176 sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13190 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13190 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13190 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ispA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ispA_context.gif]]

Revision as of 12:38, 13 May 2013

  • Description: intracellular serine protease

Gene name ispA
Synonyms
Essential no
Product intracellular serine protease
Function protein degradation
Gene expression levels in SubtiExpress: ispA
MW, pI 33 kDa, 4.522
Gene length, protein length 957 bp, 319 aa
Immediate neighbours metE, rsbRB
Sequences Protein DNA Advanced_DNA
Genetic context
IspA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
IspA expression.png















Categories containing this gene/protein

utilization of nitrogen sources other than amino acids, proteolysis

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU13190

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase S8 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ispA (according to DBTBS)
  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References