Difference between revisions of "XhlB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || host cell lysis | |style="background:#ABCDEF;" align="center"|'''Function''' || host cell lysis | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12800 xhlB] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.503 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.503 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xhlA]]'', ''[[xlyA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xhlA]]'', ''[[xlyA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12800 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:xhlB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:xhlB_context.gif]] | ||
Revision as of 12:37, 13 May 2013
- Description: putative holin
| Gene name | xhlB |
| Synonyms | xpaB |
| Essential | no |
| Product | putative holin |
| Function | host cell lysis |
| Gene expression levels in SubtiExpress: xhlB | |
| MW, pI | 9 kDa, 9.503 |
| Gene length, protein length | 261 bp, 87 aa |
| Immediate neighbours | xhlA, xlyA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
PBSX prophage, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU12800
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: SPP1 holin family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q99163
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
S Krogh, S T Jørgensen, K M Devine
Lysis genes of the Bacillus subtilis defective prophage PBSX.
J Bacteriol: 1998, 180(8);2110-7
[PubMed:9555893]
[WorldCat.org]
[DOI]
(P p)
P F Longchamp, C Mauël, D Karamata
Lytic enzymes associated with defective prophages of Bacillus subtilis: sequencing and characterization of the region comprising the N-acetylmuramoyl-L-alanine amidase gene of prophage PBSX.
Microbiology (Reading): 1994, 140 ( Pt 8);1855-67
[PubMed:7921239]
[WorldCat.org]
[DOI]
(P p)
