Difference between revisions of "CatE"

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|style="background:#ABCDEF;" align="center"|'''Function''' || essential for the viability in the presence of catechol
 
|style="background:#ABCDEF;" align="center"|'''Function''' || essential for the viability in the presence of catechol
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU08240 catE]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU08240 catE]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 5.302   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 5.302   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[catD]]'', ''[[yfiF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[catD]]'', ''[[yfiF]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12653&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08240 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08240 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08240 Advanced_DNA]
 
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Revision as of 12:22, 13 May 2013

  • Description: catechol 2,3-dioxygenase

Gene name catE
Synonyms yfiE
Essential no
Product catechol 2,3-dioxygenase
Function essential for the viability in the presence of catechol
Gene expression levels in SubtiExpress: catE
MW, pI 31 kDa, 5.302
Gene length, protein length 855 bp, 285 aa
Immediate neighbours catD, yfiF
Sequences Protein DNA Advanced_DNA
Genetic context
YfiE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CatE expression.png
























Categories containing this gene/protein

resistance against oxidative and electrophile stress

This gene is a member of the following regulons

CatR regulon, YodB regulon

The gene

Basic information

  • Locus tag: BSU08240

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • strong induction by diamide and quinones (such as catechol) (YodB, CatR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References