Difference between revisions of "YabP"

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|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU00600 yabP]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00600 yabP]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 6.341   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 6.341   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabO]]'', ''[[yabQ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabO]]'', ''[[yabQ]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB11836&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00600 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00600 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00600 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yabP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yabP_context.gif]]

Revision as of 11:56, 13 May 2013

  • Description: required for sporulation at a late stage

Gene name yabP
Synonyms
Essential no
Product unknown
Function sporulation
Gene expression levels in SubtiExpress: yabP
MW, pI 11 kDa, 6.341
Gene length, protein length 300 bp, 100 aa
Immediate neighbours yabO, yabQ
Sequences Protein DNA Advanced_DNA
Genetic context
YabP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YabP expression.png
























Categories containing this gene/protein

sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU00600

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: forespore outer membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christiaan van Ooij, Patrick Eichenberger, Richard Losick
Dynamic patterns of subcellular protein localization during spore coat morphogenesis in Bacillus subtilis.
J Bacteriol: 2004, 186(14);4441-8
[PubMed:15231775] [WorldCat.org] [DOI] (P p)

Kei Asai, Hiromu Takamatsu, Megumi Iwano, Takeko Kodama, Kazuhito Watabe, Naotake Ogasawara
The Bacillus subtilis yabQ gene is essential for formation of the spore cortex.
Microbiology (Reading): 2001, 147(Pt 4);919-927
[PubMed:11283287] [WorldCat.org] [DOI] (P p)

P Fawcett, P Eichenberger, R Losick, P Youngman
The transcriptional profile of early to middle sporulation in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2000, 97(14);8063-8
[PubMed:10869437] [WorldCat.org] [DOI] (P p)