Difference between revisions of "DgcK"

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(Biological materials)
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhcK_985734_986813_-1 yhcK] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhcK_985734_986813_-1 yhcK] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Mutant:'''
 
* '''Mutant:'''
** GP848 (''[[yhcK]]''::''ermC''), available in [[Stülke]] lab
+
** GP848 (''[[yhcK]]''::''ermC''), available in [[Jörg Stülke]]'s lab
  
 
* '''Expression vector:'''
 
* '''Expression vector:'''
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=References=
 
=References=
'''Additional publications:''' {{PubMed|22821967}}
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<pubmed> 22821967</pubmed>
 +
 
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 08:06, 19 April 2013

  • Description: potential c-di-GMP synthase

Gene name yhcK
Synonyms
Essential no
Product potential diguanylate cyclase
Function unknown
Gene expression levels in SubtiExpress: yhcK
MW, pI 40 kDa, 8.571
Gene length, protein length 1077 bp, 359 aa
Immediate neighbours yhcJ, tcyP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhcK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhcK expression.png















Categories containing this gene/protein

membrane proteins, metabolism of signalling nucleotides

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU09120

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
    • contains a C-terminal GGDEF domain PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References