Difference between revisions of "YmxH"
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || [[sporulation]] protein |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
| Line 41: | Line 41: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[SigE regulon]]}} | |
=The gene= | =The gene= | ||
| Line 50: | Line 50: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| + | * a ''[[ylmC]] [[ymxH]]'' double mutant has a severe [[sporulation]] defect (1% [[sporulation]] as compared to the wild type or single mutants), the block is at stage III of [[sporulation]] {{PubMed|23396918}} | ||
=== Database entries === | === Database entries === | ||
| Line 58: | Line 59: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| Line 106: | Line 106: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ymxH_1743924_1744181_1 ymxH] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ymxH_1743924_1744181_1 ymxH] {{PubMed|22383849}} | ||
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|22383849,14523133}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** expressed | + | ** expressed early during [[sporulation]] in the mother cell ([[SigE]]) {{PubMed|22383849,14523133}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 134: | Line 134: | ||
=References= | =References= | ||
| − | <pubmed>8098035 23123912 22383849</pubmed> | + | <pubmed>8098035 23123912 22383849 14523133 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:46, 13 February 2013
- Description: sporulation protein
| Gene name | ymxH |
| Synonyms | |
| Essential | no |
| Product | sporulation protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: ymxH | |
| MW, pI | 9 kDa, 5.437 |
| Gene length, protein length | 255 bp, 85 aa |
| Immediate neighbours | mlpA, spoVFA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16720
Phenotypes of a mutant
- a ylmC ymxH double mutant has a severe sporulation defect (1% sporulation as compared to the wild type or single mutants), the block is at stage III of sporulation PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): YlmC
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q04811
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ymxH PubMed
- Regulation:
- expressed early during sporulation in the mother cell (SigE) PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
