Difference between revisions of "YurQ"

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=Expression and regulation=
 
=Expression and regulation=
* '''Operon:''' ''[[yurR]]-[[yurQ]]-[[frlB]]-[[frlO]]-[[frlN]]-[[frlM]]-[[frlD]]'' {{PubMed|12823818}}
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* '''Operon:'''  
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yurQ_3352312_3352686_-1 yurQ] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yurQ_3352312_3352686_-1 yurQ] {{PubMed|22383849}}
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=References=
 
=References=
 +
<pubmed></pubmed>
 
  <big>''Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J''  </big>
 
  <big>''Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J''  </big>
 
  <big>'''RNA processing in ''Bacillus subtilis'': identification of targets of the essential RNase Y.''' </big>
 
  <big>'''RNA processing in ''Bacillus subtilis'': identification of targets of the essential RNase Y.''' </big>
 
  <big>Mol Microbiol. 2011 81(6): 1459-1473. </big>
 
  <big>Mol Microbiol. 2011 81(6): 1459-1473. </big>
 
  [http://www.ncbi.nlm.nih.gov/pubmed/21815947 PubMed:21815947]
 
  [http://www.ncbi.nlm.nih.gov/pubmed/21815947 PubMed:21815947]
<pubmed> 12823818</pubmed>
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[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:18, 26 November 2012

  • Description: unknown

Gene name yurQ
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yurQ
MW, pI 14 kDa, 8.119
Gene length, protein length 372 bp, 124 aa
Immediate neighbours frlB, yurR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YurQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YurQ expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU32620

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • the mRNA is substantially stabilized upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 81(6): 1459-1473. 
PubMed:21815947