Difference between revisions of "CtaD"

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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/17114254 PubMed]
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
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|style="background:#ABCDEF;" align="center"| '''Product''' || cytochrome-c oxidase (subunit I)
 
|style="background:#ABCDEF;" align="center"| '''Product''' || cytochrome-c oxidase (subunit I)
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
  
essential [http://www.ncbi.nlm.nih.gov/pubmed/17114254 PubMed]
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essential according to [http://www.ncbi.nlm.nih.gov/pubmed/17114254 PubMed], non-essential according to {{PubMed|10551842}}
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 17:21, 15 November 2012

  • Description: cytochrome-c oxidase (subunit I)

Gene name ctaD
Synonyms
Essential no
Product cytochrome-c oxidase (subunit I)
Function respiration
Gene expression levels in SubtiExpress: ctaD
MW, pI 68 kDa, 6.985
Gene length, protein length 1866 bp, 622 aa
Immediate neighbours ctaC, ctaE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CtaD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CtaD expression.png















Categories containing this gene/protein

respiration, membrane proteins

This gene is a member of the following regulons

Abh regulon, AbrB regulon, ResD regulon

The gene

Basic information

  • Locus tag: BSU14900

Phenotypes of a mutant

essential according to PubMed, non-essential according to PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O (according to Swiss-Prot)
  • Protein family: heme-copper respiratory oxidase family (according to Swiss-Prot)
  • Paralogous protein(s): QoxB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed under anaerobic conditions (ResD) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed