Difference between revisions of "YkzB"

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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykzB_1397938_1398093_1 ykzB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykzB_1397938_1398093_1 ykzB] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|10671441}}
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|10671441}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 20:15, 3 November 2012

  • Description: unknown

Gene name ykzB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykzB
MW, pI 5 kDa, 4.558
Gene length, protein length 153 bp, 51 aa
Immediate neighbours tnrA, ykoL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkzB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkzB expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

TnrA regulon

The gene

Basic information

  • Locus tag: BSU13320

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References