Difference between revisions of "RpsK"

From SubtiWiki
Jump to: navigation, search
Line 8: Line 8:
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
+
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes {{PubMed|23002217,12682299}}
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] S11 (BS11)
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] S11 (BS11)
Line 37: Line 37:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 58: Line 54:
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
  
essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
+
essential {{PubMed|23002217,12682299}}
  
 
=== Database entries ===
 
=== Database entries ===
Line 143: Line 139:
  
 
=References=
 
=References=
 
+
'''Additional publications:''' {{PubMed|23002217}}
 
<pubmed>8635744,, 19653700 </pubmed>
 
<pubmed>8635744,, 19653700 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:30, 26 September 2012

Gene name rpsK
Synonyms
Essential yes PubMed
Product ribosomal protein S11 (BS11)
Function translation
Gene expression levels in SubtiExpress: rpsK
Interactions involving this protein in SubtInteract: RpsK
MW, pI 13 kDa, 12.116
Gene length, protein length 393 bp, 131 aa
Immediate neighbours rpsM, rpoA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpsK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpsK expression.png















Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01420

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed