Difference between revisions of "YwjD"

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* '''Description:''' similar to UV-endonuclease <br/><br/>
+
* '''Description:''' sporulation specific UV-damage-endonuclease <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
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|style="background:#ABCDEF;" align="center"| '''Product''' || UV-damage-endonuclease
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|style="background:#ABCDEF;" align="center"|'''Function''' || protection of developing and dormant spores against UV DNA damage
 
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|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU37200 ywjD]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU37200 ywjD]

Revision as of 18:49, 7 September 2012

  • Description: sporulation specific UV-damage-endonuclease

Gene name ywjD
Synonyms
Essential no
Product UV-damage-endonuclease
Function protection of developing and dormant spores against UV DNA damage
Gene expression levels in SubtiExpress: ywjD
MW, pI 36 kDa, 8.99
Gene length, protein length 960 bp, 320 aa
Immediate neighbours ywjE, ywjC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwjD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwjD expression.png















Categories containing this gene/protein

DNA repair/ recombination, sporulation proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU37200

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: uve1/uvsE family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References