Difference between revisions of "SpsF"

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|style="background:#ABCDEF;" align="center"|'''Function''' || spore coat polysaccharide synthesis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || spore coat polysaccharide synthesis
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU37860 spsF]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.515   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.515   

Revision as of 17:09, 7 August 2012

  • Description: spore coat polysaccharide synthesis

Gene name spsF
Synonyms ipa-68d
Essential no
Product unknown
Function spore coat polysaccharide synthesis
Gene expression levels in SubtiExpress: spsF
MW, pI 27 kDa, 5.515
Gene length, protein length 717 bp, 239 aa
Immediate neighbours spsG, spsE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SpsF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpsF expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU37860

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CMP-NeuNAc synthetase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)

E Presecan, I Moszer, L Boursier, H Cruz Ramos, V de la Fuente, M-F Hullo, C Lelong, S Schleich, A Sekowska, B H Song, G Villani, F Kunst, A Danchin, P Glaser
The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees).
Microbiology (Reading): 1997, 143 ( Pt 10);3313-3328
[PubMed:9353933] [WorldCat.org] [DOI] (P p)