DegV

• Description: fatty acid binding protein
  
  

Gene name	degV
Synonyms	yviA, sacU
Essential	no
Product	fatty acid binding protein
Function	unknown
Gene expression levels in SubtiExpress: degV
MW, pI	31 kDa, 5.227
Gene length, protein length	843 bp, 281 aa
Immediate neighbours	comFA, degU
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

lipid metabolism/ other

The gene

Basic information

• Locus tag: BSU35480

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity: Diphosphate + H₂O = 2 phosphate (according to Swiss-Prot)

• Protein family: UPF0230 (degV) family (according to Swiss-Prot) PpaX family (according to Swiss-Prot)

• Paralogous protein(s): YitS

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure: 3FYS

• UniProt: P32436

• KEGG entry: [3]

• E.C. number: 3.6.1.1

Expression and regulation

• Operon: degV PubMed

• Expression browser: degV PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Jie Nan, Yanfeng Zhou, Cheng Yang, Erik Brostromer, Ole Kristensen, Xiao Dong Su
Structure of a fatty-acid-binding protein from Bacillus subtilis determined by sulfur-SAD phasing using in-house chromium radiation.
Acta Crystallogr D Biol Crystallogr: 2009, 65(Pt 5);440-8
[PubMed:19390149] [WorldCat.org] [DOI] (I p)

J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657] [WorldCat.org] [DOI] (P p)