Difference between revisions of "YbyB"
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| − | + | * '''Description:''' general stress protein, survival of ethanol stress <br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.221 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.221 | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:ybyB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ybyB_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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* '''Operon:''' ''ybyB'' (according to [http://dbtbs.hgc.jp/COG/prom/ybyB.html DBTBS]) | * '''Operon:''' ''ybyB'' (according to [http://dbtbs.hgc.jp/COG/prom/ybyB.html DBTBS]) | ||
| − | * | + | * '''[[Sigma factor]]:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] |
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* '''Regulation:''' induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | * '''Regulation:''' induced by stress ([[SigB]]) [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 10:44, 7 August 2012
- Description: general stress protein, survival of ethanol stress
| Gene name | ybyB |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | survival of ethanol stress |
| MW, pI | 9 kDa, 9.221 |
| Gene length, protein length | 258 bp, 86 aa |
| Immediate neighbours | cypC, ybeC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02110
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31441
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ybyB (according to DBTBS)
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
