Difference between revisions of "RtpA"
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| − | + | * '''Description:''' anti-[[MtrB|TRAP]]<br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of tryptophan biosynthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of tryptophan biosynthesis | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RtpA RtpA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RtpA RtpA] | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:yczA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yczA_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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* '''Operon:''' ''[[rtpA]]-[[ycbK]]'' {{PubMed|10706627}} | * '''Operon:''' ''[[rtpA]]-[[ycbK]]'' {{PubMed|10706627}} | ||
| − | * | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|10706627}} |
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* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 10:37, 7 August 2012
- Description: anti-TRAP
| Gene name | rtpA |
| Synonyms | yczA |
| Essential | no |
| Product | anti-TRAP |
| Function | regulation of tryptophan biosynthesis |
| Interactions involving this protein in SubtInteract: RtpA | |
| Metabolic function and regulation of this protein in SubtiPathways: Phe, Tyr, Trp | |
| MW, pI | 5 kDa, 4.862 |
| Gene length, protein length | 159 bp, 53 aa |
| Immediate neighbours | ycbJ, ycbK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- UniProt: O31466
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532]
[WorldCat.org]
[DOI]
(I p)
Paul Gollnick, Paul Babitzke, Alfred Antson, Charles Yanofsky
Complexity in regulation of tryptophan biosynthesis in Bacillus subtilis.
Annu Rev Genet: 2005, 39;47-68
[PubMed:16285852]
[WorldCat.org]
[DOI]
(P p)
Original Publications
