Difference between revisions of "RrnB-16S"
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=== Additional information=== | === Additional information=== | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''rrnB'' | + | * '''Operon:''' |
| + | ** ''[[rrnB-16S]]-[[rrnB-23S]]- [[rrnB-5S]]-[[trnB-Val]]-[[trnB-Thr]]-[[trnB-Lys]]-[[trnB-Leu1]]-[[trnB-Leu2]]-[[trnB-Gly1]]-[[trnB-Arg]]-[[trnB-Pro]]-[[trnB-Ala]]-[[trnB-Met1]]-[[trnB-Met3]]-[[trnB-Ser1]]-[[trnB-Met2]]-[[trnB-Asp]]-[[trnB-Phe]]-[[trnB-His]]-[[trnB-Gly2]]-[[trnB-Ile2]]-[[trnB-Asn]]-[[trnB-Ser2]]-[[trnB-Glu]]'' {{PubMed|2414156}} | ||
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
Revision as of 09:10, 2 August 2012
- Description: 16S rRNA
| Gene name | rrnB-16S |
| Synonyms | |
| Essential | no |
| Product | ribosomal RNA-16S |
| Function | translation |
| Gene length | 1550 bp |
| Immediate neighbours | rrnB-23S, thiT |
| Gene sequence (+200bp) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
- Structure:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation: Passive transcriptional regulation by cellular GTP concentration
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
Labs working on this gene/RNA
Your additional remarks
References
Additional publications: PubMed
Hideaki Nanamiya, Makiko Sato, Kenta Masuda, Mikiko Sato, Tetsuya Wada, Shota Suzuki, Yousuke Natori, Masato Katano, Genki Akanuma, Fujio Kawamura
Bacillus subtilis mutants harbouring a single copy of the rRNA operon exhibit severe defects in growth and sporulation.
Microbiology (Reading): 2010, 156(Pt 10);2944-2952
[PubMed:20634236]
[WorldCat.org]
[DOI]
(I p)
Yousuke Natori, Kazumi Tagami, Kana Murakami, Sawako Yoshida, Osamu Tanigawa, Yoonsuh Moh, Kenta Masuda, Tetsuya Wada, Shota Suzuki, Hideaki Nanamiya, Yuzuru Tozawa, Fujio Kawamura
Transcription activity of individual rrn operons in Bacillus subtilis mutants deficient in (p)ppGpp synthetase genes, relA, yjbM, and ywaC.
J Bacteriol: 2009, 191(14);4555-61
[PubMed:19447912]
[WorldCat.org]
[DOI]
(I p)
Libor Krásný, Richard L Gourse
An alternative strategy for bacterial ribosome synthesis: Bacillus subtilis rRNA transcription regulation.
EMBO J: 2004, 23(22);4473-83
[PubMed:15496987]
[WorldCat.org]
[DOI]
(P p)
C J Green, G C Stewart, M A Hollis, B S Vold, K F Bott
Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB.
Gene: 1985, 37(1-3);261-6
[PubMed:2414156]
[WorldCat.org]
[DOI]
(P p)
