Difference between revisions of "YhjR"

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* '''Description:''' unknown <br/><br/>
+
* '''Description:''' spore coat protein <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+
|style="background:#ABCDEF;" align="center"| '''Product''' || spore coat protein
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || protection of the spore
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 5.951   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 5.951   
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<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
{{SubtiWiki regulon|[[SigE regulon]]}},
 
{{SubtiWiki regulon|[[SigE regulon]]}},
{{SubtiWiki regulon|[[SigK regulon]]}}
+
{{SubtiWiki regulon|[[SigK regulon]]}},
 +
{{SubtiWiki regulon|[[GerE regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
+
* '''[[Localization]]:'''
 +
** spore coat {{PubMed|22171814}}
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Regulation:'''  
 
* '''Regulation:'''  
** expressed during sporulation in the mother cell ([[SigE]], [[SigK]]) {{PubMed|12480901,15383836}}
+
** expressed during sporulation in the mother cell ([[SigE]], [[SigK]], [[GerE]]) {{PubMed|12480901,15383836}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[GerE]]: transcription repression {{PubMed|15383836}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
<pubmed>12480901 15383836 </pubmed>
+
<pubmed>12480901 15383836 22171814</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:37, 29 July 2012

  • Description: spore coat protein

Gene name yhjR
Synonyms
Essential no
Product spore coat protein
Function protection of the spore
MW, pI 17 kDa, 5.951
Gene length, protein length 435 bp, 145 aa
Immediate neighbours yhjQ, addB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YhjR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhjR expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SigK regulon, GerE regulon

The gene

Basic information

  • Locus tag: BSU10610

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References