Difference between revisions of "YorW"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yorW_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yorW_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yorW_2170771_2171136_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yorW_expression.png|500px]]
 
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Revision as of 11:21, 19 April 2012

  • Description: unknown

Gene name yorW
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 13 kDa, 5.099
Gene length, protein length 363 bp, 121 aa
Immediate neighbours yorX, yorV
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YorW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YorW expression.png
























Categories containing this gene/protein

SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU20230

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • the mRNA is substantially stabilized upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 81(6): 1459-1473. 
PubMed:21815947