Difference between revisions of "YvcA"

From SubtiWiki
Jump to: navigation, search
Line 99: Line 99:
 
* '''Operon:''' ''[[yvcA]]–[[yvcB]]–[[yvzA]]'' {{PubMed|17590234}}
 
* '''Operon:''' ''[[yvcA]]–[[yvcB]]–[[yvzA]]'' {{PubMed|17590234}}
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvcA_3581965_3582690_-1 yvcA] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 07:17, 17 April 2012

  • Description: required for complex colony development

Gene name yvcA
Synonyms
Essential no
Product lipoprotein
Function complex colony development
MW, pI 27 kDa, 6.834
Gene length, protein length 723 bp, 241 aa
Immediate neighbours yvcB, hisI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvcA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

biofilm formation, membrane proteins

This gene is a member of the following regulons

AbrB regulon, DegU regulon

The gene

Basic information

  • Locus tag: BSU34850

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Daniel T Verhamme, Ewan J Murray, Nicola R Stanley-Wall
DegU and Spo0A jointly control transcription of two loci required for complex colony development by Bacillus subtilis.
J Bacteriol: 2009, 191(1);100-8
[PubMed:18978066] [WorldCat.org] [DOI] (I p)

Daniël T Verhamme, Taryn B Kiley, Nicola R Stanley-Wall
DegU co-ordinates multicellular behaviour exhibited by Bacillus subtilis.
Mol Microbiol: 2007, 65(2);554-68
[PubMed:17590234] [WorldCat.org] [DOI] (P p)