Difference between revisions of "YoaW"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[yoaW]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yoaW.html DBTBS])
 
* '''Operon:''' ''[[yoaW]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yoaW.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|3104598}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yoaW_2046980_2047411_-1 yoaW] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigE]] {{PubMed|3104598}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[AbrB]]:  transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989 PubMed]
 
** [[AbrB]]:  transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15101989 PubMed]
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:33, 16 April 2012

  • Description: unknown

Gene name yoaW
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 16 kDa, 5.159
Gene length, protein length 429 bp, 143 aa
Immediate neighbours yoaV, yoaZ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YoaW context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

AbrB regulon, SigE regulon

The gene

Basic information

  • Locus tag: BSU18780

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: eamA transporter family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot), extracellular (signal peptide) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed during logrithmic growth (AbrB) PubMed
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References