Difference between revisions of "YcbE"

From SubtiWiki
Jump to: navigation, search
(Extended information on the protein)
Line 46: Line 46:
  
 
* '''Locus tag:''' BSU02480
 
* '''Locus tag:''' BSU02480
 +
 +
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gudP_270396_271763_1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 13:07, 24 January 2012

  • Description: galactarate/glucarate transporter in (proton symport)

Gene name ycbE
Synonyms gudP
Essential no
Product galactarate/glucarate transporter in (proton symport)
Function glucarate uptake
MW, pI 49 kDa, 9.207
Gene length, protein length 1365 bp, 455 aa
Immediate neighbours ycbD, ycbF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcbE context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

YcbG regulon

The gene

Basic information

  • Locus tag: BSU02480

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Phthalate permease family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced by D-glucarate/galactarate (YcbG) PubMed
  • Regulatory mechanism: YcbG: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Shigeo Hosoya, Kunio Yamane, Michio Takeuchi, Tsutomu Sato
Identification and characterization of the Bacillus subtilis D-glucarate/galactarate utilization operon ycbCDEFGHJ.
FEMS Microbiol Lett: 2002, 210(2);193-9
[PubMed:12044674] [WorldCat.org] [DOI] (P p)