YdiR

• Description: component of the BsuM DNA restriction system
  
  

Gene name	ydiR
Synonyms
Essential	no
Product	unknown
Function	BsuM DNA restriction
MW, pI	35 kDa, 4.385
Gene length, protein length	939 bp, 313 aa
Immediate neighbours	ydzW/7, ydiS
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

DNA restriction/ modification

The gene

Basic information

• Locus tag: BSU06090

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: O35025

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: ydiR-ydiS-ydjA PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Tomoko Maehara, Mitsuhiro Itaya, Mitsuo Ogura, Teruo Tanaka
Effect of Bacillus subtilis BsuM restriction-modification on plasmid transfer by polyethylene glycol-induced protoplast fusion.
FEMS Microbiol Lett: 2011, 325(1);49-55
[PubMed:22092861] [WorldCat.org] [DOI] (I p)

Hideyuki Ohshima, Satoshi Matsuoka, Kei Asai, Yoshito Sadaie
Molecular organization of intrinsic restriction and modification genes BsuM of Bacillus subtilis Marburg.
J Bacteriol: 2002, 184(2);381-9
[PubMed:11751814] [WorldCat.org] [DOI] (P p)