Difference between revisions of "RpoE"

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(Extended information on the protein)
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:''' closely associated to [[RNA polymerase]] ([[RpoA]](2)-[[RpoB]]-[[RpoC]]) {{PubMed|20724389}}  
+
* '''[[SubtInteract|Interactions]]:'''
 +
** closely associated to [[RNA polymerase]] ([[RpoA]](2)-[[RpoB]]-[[RpoC]]) {{PubMed|20724389}}  
  
* '''Localization:'''closely associated with [[RNA polymerase]] involved in transcribing both mRNA and rRNA operons {{PubMed|20724389}}
+
* '''[[Localization]]:'''closely associated with [[RNA polymerase]] involved in transcribing both mRNA and rRNA operons {{PubMed|20724389}}
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 12:28, 8 November 2011

Gene name rpoE
Synonyms
Essential no
Product RNA polymerase delta subunit
Function transcription
Interactions involving this protein in SubtInteract: RpoE
Metabolic function and regulation of this protein in SubtiPathways:
Fatty acid degradation
MW, pI 20 kDa, 3.654
Gene length, protein length 519 bp, 173 aa
Immediate neighbours pyrG, acdA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpoE context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

transcription

This gene is a member of the following regulons

FadR regulon

The gene

Basic information

  • Locus tag: BSU37160

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: rpoE family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • fadF: repressed in the absence of long-chain fatty acids (FadR) PubMed
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Arthur Aronson, Purdue University, West Lafayette, USA homepage

Your additional remarks

References

Additional publications: PubMed